STRINGSTRING
AKA24754.1 AKA24754.1 AKA22551.1 AKA22551.1 AKA24755.1 AKA24755.1 AKA24750.1 AKA24750.1 AKA24752.1 AKA24752.1 AKA24749.1 AKA24749.1 AKA24747.1 AKA24747.1 AKA22548.1 AKA22548.1 AKA24751.1 AKA24751.1 AKA22549.1 AKA22549.1 AKA24744.1 AKA24744.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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[Homology]
Score
AKA24754.1HxcU pseudopilin; Pfam: Type II transport protein GspH; TIGRFAM: typeII_sec_gspH: type II secretion system protein H; Pfam: Type IV pilin N-term methylation site GFxxxE; TIGRFAM: IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain; PRINTS: Bacterial general secretion pathway protein H signature. (153 aa)    
Predicted Functional Partners:
AKA22551.1
General secretion pathway protein H; TIGRFAM: IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain; TIGRFAM: typeII_sec_gspH: type II secretion system protein H; Pfam: Type II transport protein GspH; PRINTS: Bacterial general secretion pathway protein H signature; Pfam: Type IV pilin N-term methylation site GFxxxE.
  
  
  0.915
AKA24755.1
Pfam: Type II secretion system (T2SS), protein J.
  
 
 0.866
AKA24750.1
Pfam: Type II secretion system (T2SS), protein K.
 
 
 0.864
AKA24752.1
Pfam: Type II secretion system (T2SS), protein I; TIGRFAM: gspI: type II secretion system protein I.
 
  
 0.834
AKA24749.1
General secretion pathway protein L; Pfam: GspL periplasmic domain.
 
  
 0.792
AKA24747.1
General secretion pathway protein D; Pfam: Bacterial type II/III secretion system short domain; TIGRFAM: type_II_gspD: type II secretion system protein D; PRINTS: Bacterial general secretion pathway protein D signature; Pfam: Bacterial type II and III secretion system protein.
 
  
 0.765
AKA22548.1
Pfam: Type II secretion system (T2SS), protein K.
 
 
 0.716
AKA24751.1
PRINTS: Bacterial general secretion pathway protein G signature; TIGRFAM: typeII_sec_gspG: type II secretion system protein G; Pfam: Type IV pilin N-term methylation site GFxxxE; TIGRFAM: IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain; Pfam: Type II secretion system (T2SS), protein G.
 
  
 0.713
AKA22549.1
TIGRFAM: gspJ: type II secretion system protein J; Pfam: Type II secretion system (T2SS), protein J; TIGRFAM: IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain; Pfam: Type IV pilin N-term methylation site GFxxxE.
 
 
 0.685
AKA24744.1
Pfam: Type II secretion system (T2SS), protein F; PRINTS: Bacterial general secretion pathway protein F signature; TIGRFAM: GspF: type II secretion system protein F.
 
  
 0.658
Your Current Organism:
Pseudomonas chlororaphis
NCBI taxonomy Id: 587753
Other names: ATCC 9446, Bacillus chlororaphis, CCUG 552 B, CFBP 2132, CIP 63.22, DSM 50083, HAMBI 2011, IFO 3904, JCM 2778, LMG 5004, LMG:5004, NBRC 3904, NCCB 76041, NCIB 9392, NCIMB 9392, NCTC 13002, P. chlororaphis, Pseudomonas sp. UFB2
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